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A Framework for Understanding and Classifying Ontology Applications - A good paper on the various kinds and uses of ontology in real-world applications (PDF).
 
Achille C. Varzi - Home Page - Achille Varzi has published extensively in the field of Ontology. Notably, he has researched, along with Roberto Casati, the previously neglected study of holes as objects.
 
Buffalo Ontology Site - Information on ontology, on the history of ontology, and on contemporary ontology and its applications.
 
Center for Applied Ontology - The Center for Applied Ontology brings together members of various disciplines interested in extending the tools of descriptive ontology for proscriptive purposes.
 
Descriptive and Formal Ontology - The development of ontology from philosophy to knowledge engineering.
 
Holes - Short article by Roberto Casati of the École Polytechnique and Achille C. Varzi of Columbia.
 
The Enterprise Ontology - An attempt to systematize a business grammar and syntax.
 
The Identity of Indiscernibles - Entry by Peter Forrest in the Stanford Encyclopaedia of Philosophy. The principle is due to Leibniz, and states two entities are identical if they share the same properties.
 
The Ontology of Cyberspace - The Ontology of Cyberspace
 
Tropes - An article describing tropes by John Bacon.
 
What is an Ontology? - Short and long answers from Tom Gruber of Stanford University, Knowledge Systems Lab.
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