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Accelrys, Inc - Producer of various molecular modeling and simulation software for both life and materials science research, like cerius, catalyst, insightII, quanta.
 
CrystalMaker Software - Crystal structures visualization and diffraction software for Macintosh.
 
Gaussian Inc. - Gaussian structure calculation software for your PC.
 
HGS Hinomoto Plastics Co., Ltd. - Plastic molecular structure models for research and education in science, intended especially for biochemistry.
 
Hypercube, Inc - Producer of HyperChem, a molecular modeling package for windows and HyperNMR, a program for prediction of one-dimensional NMR spectra.
 
Indigo Instruments - Plastic molecular models for use in chemistry, molecular biology, semiconductors, crystal lattice structures, organizational behavior and theory.
 
Interprobe Chemical Services - Offers a variety chemical software focusing on molecular modeling, visualization and analysis of proteins/peptides. Free for academic use.
 
Labquip - plastic molecular models for constructing polypeptides and DNA molecules.
 
Molecular Discovery Ltd. - Producer of GRID, a program for determining energetically favorable binding sites on molecules of known structure, and other "tools to derive high quality 3D descriptors with the purpose to link Structure-Based Drug Design, Chemoinformatics and Bioinformatics."
 
Molecular Model Kits - Plastic molecular structure models for research and education in science, intended especially for biochemistry.
 
Molecular-Models.com - Custom made space-filling physical models of macromolecules built using "3D-printer".
 
Schrodinger, Inc - Producer of the Jaguar quantum chemistry package and the MacroModel molecular mechanics package.
 
Tripos, Inc. - Researches, develops and markets application software, chemical compound libraries, databases and services used in the pre-clinical phases of new pharmaceutical development. (Nasdaq: TRPS).
 
Wavefunction, Inc - Producer of spartan, a quantum chemical calculation program with nice visualization opportunities.
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